Synthetic Biology LIMS
(In development) Microservices full-stack single-page web app built with Typescript, React, Redux, Styled Components (for CSS-in-JS), Python, Django, Redis, and PostgreSQL. Separate servers for LIMS and Payments hosted on AWS EC2 instances with Kubernetes and circleci CI/CD. Database hosted on AW...
Overview
The Synthetic Biology Laboratory Information Management System (LIMS) is an innovative platform designed to streamline the management of laboratory information and enhance workflow efficiency. It leverages modern technologies to create a robust system that handles everything from data storage to project management, enabling researchers to focus on their experiments rather than administrative tasks. With a strong emphasis on user experience, this system is built to support the unique needs of synthetic biology laboratories.
What stands out about this LIMS is its use of contemporary software development practices and a sophisticated tech stack. The combination of backend and frontend technologies, alongside an emphasis on testing methodologies, positions this system as a competitive solution in the rapidly advancing field of synthetic biology.
Features
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User-Friendly Single Page Application: Designed to provide a seamless user experience, ensuring that users can navigate the platform without any hassle.
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Robust Database Architecture: Engineered to Boyce-Codd Normal form using PostgreSQL, optimizing data retrieval and storage for high performance.
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Advanced API Design: Utilizing Django and django-rest-framework to facilitate smooth integration with other applications and services.
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Secure Authentication: Employing JSON Web Token authentication with Redis to protect user data and maintain integrity across sessions.
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State Management with Redux: Implementing complex state management using Redux for efficient data handling in the React application.
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Comprehensive Testing Framework: Incorporating unit, integration, and end-to-end testing practices with Jest, pytest, and Cypress to ensure reliability and robustness.
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Dockerized Development Environment: Simplifying the coordination of services like Django, PostgreSQL, Redis, and React, enhancing the development workflow.
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Continuous Integration: Utilizing CircleCI for automated testing and deployment processes, ensuring code quality and efficient releases.
- Django
Django is a high-level Python web framework that encourages rapid development and clean, pragmatic design. It follows the model-view-controller (MVC) architectural pattern, providing an extensive set of built-in tools and conventions to streamline the creation of robust and scalable web applications.
- React
React is a widely used JavaScript library for building user interfaces and single-page applications. It follows a component-based architecture and uses a virtual DOM to efficiently update and render UI components
- Styled Components
Styled Components is a popular library for styling React components using CSS syntax. It allows you to write CSS in your JavaScript code, making it easier to create dynamic styles that are specific to each component.
- Docker
A website that uses Docker for containerization to streamline development, testing, and deployment workflows. This includes features such as containerization of dependencies, automated builds and deployments, and container orchestration to ensure scalability and availability.
- Redux
Redux is a state management library for JavaScript apps that provides a predictable and centralized way to manage application state. It enables developers to write actions and reducers that update the state in response to user interactions, server responses, and other events, and can be used with a variety of front-end frameworks and back-end technologies.
- Typescript
TypeScript is a superset of JavaScript, providing optional static typing, classes, interfaces, and other features that help developers write more maintainable and scalable code. TypeScript's static typing system can catch errors at compile-time, making it easier to build and maintain large applications.